Complete mitochondrial genome of Hygrobates turcicus Pešić, Esen & Dabert, 2017 (Acari, Hydrachnidia, Hygrobatoidea)

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The aim of the study was sequencing of the mitogenome of Hygrobates turcicus Pešić, Esen & Dabert, 2017 to expand knowledge of the polymorphism and cryptic or pseudocryptic diversity within Hydrachnidia. The samples originated from Bulgaria, Vidima River near Debnewo, 42°56′41.4′′N, 24°48′44.6′′E, depth 0.4 m, stones on the bottom, water flow 0.71 m/s, temperature 10 °C, pH 8.53, oxygen 110%, conductivity 279 µS/cm, hardness 121 CaO mg/l; 11 males, 27 females, 2 deutonymphs 12.x.2019 leg. Zawal, Michoński & Bańkowska; one male and one female dissected and slides mounted. The study was carried out using the following methods: DNA extraction, sequencing, assembly and annotation, comparison with other populations of H. turcicus, and multigene phylogeny. As a result of the study, it was determined that the mitogenome is 15,006 bp long and encodes for 13 proteins, 2 rRNAs, and 22 tRNAs. The genome is colinear with those of H. longiporus and H. taniguchii, the difference in size originating from a non-coding region located between protein-coding genes ND4L and ND3. Five genes have alternative start-codon, and four display premature termination. The multigene phylogeny obtained using all mitochondrial protein-coding genes unambiguously associates H. turcicus with the cluster formed by H. longiporus and H. taniguchii.

Tytuł
Complete mitochondrial genome of Hygrobates turcicus Pešić, Esen & Dabert, 2017 (Acari, Hydrachnidia, Hygrobatoidea)
Twórca
Zawal Andrzej ORCID 0000-0002-5838-6060
Słowa kluczowe
water mites; integrative taxonomy; complete mitogenome; Trombidiformes; freshwater biodiversity
Słowa kluczowe
wodopójki; taksonomia integratywna; kompletny mitogenom; słodkowodna bioróżnorodność
Współtwórca
Skuza Lidia ORCID 0000-0002-6362-844X
Michoński Grzegorz ORCID 0000-0001-7668-0493
Bańkowska Aleksandra ORCID 0000-0003-1037-0550
Szućko-Kociuba Izabela ORCID 0000-0002-2974-1908
Gastineau Romain ORCID 0000-0001-8661-5118
Data
2022
Typ zasobu
artykuł
Identyfikator zasobu
DOI 10.1038/s41598-022-26188-w
Źródło
Scientific Reports, 2022, 12, [br. s.]., 22063
Język
angielski
Prawa autorskie
CC BY CC BY
Dyscyplina naukowa
Nauki o Ziemi i środowisku; Dziedzina nauk ścisłych i przyrodniczych
Kategorie
Publikacje pracowników US
Data udostępnienia8 mar 2023, 09:05:51
Data mod.8 mar 2023, 09:05:51
DostępPubliczny
Aktywnych wyświetleń0